STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR18633.1Phage integrase family protein. (243 aa)    
Predicted Functional Partners:
SFR18630.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
 
     0.946
SFR18608.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.774
SFR18614.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.774
SFR19011.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.774
SFR19144.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.774
SFR18971.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.773
SFR17855.1
Hypothetical protein.
  
     0.761
SFR01348.1
Hypothetical protein.
  
     0.747
SFR07117.1
Integrase/recombinase XerC; Belongs to the 'phage' integrase family.
  
     0.661
SFR06921.1
Integrase/recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.657
Your Current Organism:
Desulfallas geothermicus
NCBI taxonomy Id: 39060
Other names: D. geothermicus, DSM 3669, Desulfotomaculum geothermicum, NBRC 112753, strain BSD
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.