Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEE20854.1 | SEE53355.1 | SAMN04488034_10136 | SAMN04488034_101776 | Protein of unknown function. | Conserved hypothetical protein. | 0.702 |
SEE51799.1 | SEE53355.1 | SAMN04488034_101733 | SAMN04488034_101776 | Putative glycerol-1-phosphate prenyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). | Conserved hypothetical protein. | 0.550 |
SEE51799.1 | SEE54895.1 | SAMN04488034_101733 | SAMN04488034_101824 | Putative glycerol-1-phosphate prenyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). | Hypothetical protein. | 0.661 |
SEE51799.1 | SEE68790.1 | SAMN04488034_101733 | SAMN04488034_10221 | Putative glycerol-1-phosphate prenyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). | 4-hydroxybenzoate polyprenyltransferase. | 0.937 |
SEE51799.1 | SEE99029.1 | SAMN04488034_101733 | SAMN04488034_10450 | Putative glycerol-1-phosphate prenyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). | Methyltransferase domain-containing protein. | 0.747 |
SEE53355.1 | SEE20854.1 | SAMN04488034_101776 | SAMN04488034_10136 | Conserved hypothetical protein. | Protein of unknown function. | 0.702 |
SEE53355.1 | SEE51799.1 | SAMN04488034_101776 | SAMN04488034_101733 | Conserved hypothetical protein. | Putative glycerol-1-phosphate prenyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). | 0.550 |
SEE53355.1 | SEE53428.1 | SAMN04488034_101776 | SAMN04488034_101778 | Conserved hypothetical protein. | Threonine/homoserine/homoserine lactone efflux protein. | 0.555 |
SEE53355.1 | SEE53462.1 | SAMN04488034_101776 | SAMN04488034_101779 | Conserved hypothetical protein. | methylated-DNA-protein-cysteine methyltransferase related protein. | 0.606 |
SEE53355.1 | SEE54895.1 | SAMN04488034_101776 | SAMN04488034_101824 | Conserved hypothetical protein. | Hypothetical protein. | 0.575 |
SEE53355.1 | SEE58351.1 | SAMN04488034_101776 | SAMN04488034_101936 | Conserved hypothetical protein. | Hypothetical protein. | 0.664 |
SEE53355.1 | SEE68790.1 | SAMN04488034_101776 | SAMN04488034_10221 | Conserved hypothetical protein. | 4-hydroxybenzoate polyprenyltransferase. | 0.681 |
SEE53355.1 | SEE99029.1 | SAMN04488034_101776 | SAMN04488034_10450 | Conserved hypothetical protein. | Methyltransferase domain-containing protein. | 0.571 |
SEE53355.1 | ctaA | SAMN04488034_101776 | SAMN04488034_11039 | Conserved hypothetical protein. | Cytochrome c oxidase assembly protein subunit 15; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. | 0.549 |
SEE53355.1 | trmB | SAMN04488034_101776 | SAMN04488034_101777 | Conserved hypothetical protein. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.607 |
SEE53428.1 | SEE53355.1 | SAMN04488034_101778 | SAMN04488034_101776 | Threonine/homoserine/homoserine lactone efflux protein. | Conserved hypothetical protein. | 0.555 |
SEE53428.1 | SEE53462.1 | SAMN04488034_101778 | SAMN04488034_101779 | Threonine/homoserine/homoserine lactone efflux protein. | methylated-DNA-protein-cysteine methyltransferase related protein. | 0.787 |
SEE53428.1 | trmB | SAMN04488034_101778 | SAMN04488034_101777 | Threonine/homoserine/homoserine lactone efflux protein. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.787 |
SEE53462.1 | SEE53355.1 | SAMN04488034_101779 | SAMN04488034_101776 | methylated-DNA-protein-cysteine methyltransferase related protein. | Conserved hypothetical protein. | 0.606 |
SEE53462.1 | SEE53428.1 | SAMN04488034_101779 | SAMN04488034_101778 | methylated-DNA-protein-cysteine methyltransferase related protein. | Threonine/homoserine/homoserine lactone efflux protein. | 0.787 |
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