STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE57322.1Mevalonate kinase. (305 aa)    
Predicted Functional Partners:
SEE57347.1
3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family.
 
 0.972
SEE56322.1
Diphosphomevalonate decarboxylase.
 
 
 0.958
SEE56350.1
Mevalonate kinase.
 
     0.789
SEE26533.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.758
SEE34690.1
Las17-binding protein actin regulator.
    
   0.748
SEE95763.1
Las17-binding protein actin regulator.
    
   0.748
SEE20945.1
Protein involved in gliding motility GldN.
  
     0.709
SEF08050.1
3-hydroxyacyl-CoA dehydrogenase.
   
 
 0.673
SEE99342.1
Hypothetical protein.
  
     0.576
SEE57397.1
Proton-dependent oligopeptide transporter, POT family.
   
   0.556
Your Current Organism:
Salinimicrobium catena
NCBI taxonomy Id: 390640
Other names: CGMCC 1.6101, DSM 23553, Flavobacteriaceae bacterium HY1, JCM 14015, S. catena, Salegentibacter catena, Salegentibacter catena Ying et al. 2007, Salinimicrobium catena (Ying et al. 2007) Lim et al. 2008 emend. Nedashkovskaya et al. 2010, strain HY1
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