STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE83425.1Uncharacterized conserved protein, DUF2267 family. (147 aa)    
Predicted Functional Partners:
SEE56873.1
Sulfotransferase domain-containing protein.
  
     0.608
SEE83335.1
Predicted N-formylglutamate amidohydrolase.
 
     0.533
SEE83368.1
Carboxylate-amine ligase.
 
     0.528
SEE94853.1
Alpha/beta hydrolase family protein.
  
     0.498
SEE83395.1
Glutathione synthase/RimK-type ligase, ATP-grasp superfamily.
       0.460
SEE94870.1
Predicted phosphoribosyltransferase.
 
     0.460
SEE30628.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
  
     0.456
SEE81721.1
Hypothetical protein.
  
     0.453
SEE74166.1
Hypothetical protein.
  
     0.446
SEE81668.1
Hypothetical protein.
  
     0.445
Your Current Organism:
Salinimicrobium catena
NCBI taxonomy Id: 390640
Other names: CGMCC 1.6101, DSM 23553, Flavobacteriaceae bacterium HY1, JCM 14015, S. catena, Salegentibacter catena, Salegentibacter catena Ying et al. 2007, Salinimicrobium catena (Ying et al. 2007) Lim et al. 2008 emend. Nedashkovskaya et al. 2010, strain HY1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.