STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE93954.1Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein. (433 aa)    
Predicted Functional Partners:
SEE93970.1
Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein.
 
 0.999
SEE93988.1
Protein-S-isoprenylcysteine O-methyltransferase Ste14.
       0.773
SEE94005.1
L-ascorbate metabolism protein UlaG, beta-lactamase superfamily.
       0.773
SEE94020.1
Methyltransferase domain-containing protein.
       0.773
SEE94034.1
Methyltransferase domain-containing protein.
       0.686
SEE93938.1
Hypothetical protein.
       0.645
SEE25563.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
    
 0.633
SEE49116.1
Succinate dehydrogenase subunit A.
     
 0.605
SEE49159.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
     
 0.591
SEE82049.1
L-proline dehydrogenase.
     
 0.555
Your Current Organism:
Salinimicrobium catena
NCBI taxonomy Id: 390640
Other names: CGMCC 1.6101, DSM 23553, Flavobacteriaceae bacterium HY1, JCM 14015, S. catena, Salegentibacter catena, Salegentibacter catena Ying et al. 2007, Salinimicrobium catena (Ying et al. 2007) Lim et al. 2008 emend. Nedashkovskaya et al. 2010, strain HY1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.