STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macBPutative ABC transport system ATP-binding protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. (234 aa)    
Predicted Functional Partners:
SEE57823.1
Putative ABC transport system permease protein.
  0.993
SEF08553.1
Putative ABC transport system permease protein.
  0.993
SEE22948.1
Putative ABC transport system permease protein.
  0.992
SEE23006.1
Putative ABC transport system permease protein.
  0.992
SEF00275.1
ATP-binding cassette, subfamily B, MsbA.
    
0.903
SEF08164.1
ATP-binding cassette, subfamily B, MsbA.
    
0.857
SEE99453.1
ABC-2 type transport system ATP-binding protein.
 
    
0.837
SEE95066.1
Lipoprotein-releasing system permease protein.
 
  0.834
SEE22800.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   0.829
SEE41777.1
Lipoprotein-releasing system permease protein.
  
  0.806
Your Current Organism:
Salinimicrobium catena
NCBI taxonomy Id: 390640
Other names: CGMCC 1.6101, DSM 23553, Flavobacteriaceae bacterium HY1, JCM 14015, S. catena, Salegentibacter catena, Salegentibacter catena Ying et al. 2007, Salinimicrobium catena (Ying et al. 2007) Lim et al. 2008 emend. Nedashkovskaya et al. 2010, strain HY1
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