STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI56035.1Hypothetical protein. (183 aa)    
Predicted Functional Partners:
SFI55999.1
Protein of unknown function.
 
     0.564
SFI56071.1
Type II restriction/modification system, DNA methylase subunit YeeA.
       0.538
SFI56130.1
Glucans biosynthesis protein.
       0.525
SFI55966.1
Toprim domain-containing protein.
 
     0.495
SFJ87027.1
Hypothetical protein.
  
     0.428
Your Current Organism:
Jannaschia pohangensis
NCBI taxonomy Id: 390807
Other names: DSM 19073, J. pohangensis, Jannaschia pohangensis Kim et al. 2008, KACC 11609, strain H1-M8
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.