STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ30082.1Cysteine-rich CPCC. (173 aa)    
Predicted Functional Partners:
SFJ29975.1
Cobalt-precorrin 5A hydrolase / precorrin-3B C17-methyltransferase.
       0.812
SFJ30046.1
precorrin-6Y C5,15-methyltransferase (decarboxylating).
       0.783
SFJ29943.1
Precorrin-4/cobalt-precorrin-4 C11-methyltransferase.
       0.776
SFJ30007.1
Precorrin-2/cobalt-factor-2 C20-methyltransferase.
       0.776
SFJ30125.1
precorrin-8X methylmutase.
       0.776
SFJ30176.1
Sirohydrochlorin cobaltochelatase.
       0.705
SFJ30209.1
Hypothetical protein.
       0.701
SFJ29908.1
Hypothetical protein.
       0.495
SFJ67208.1
Protein of unknown function.
  
     0.488
SFJ67262.1
Hypothetical protein.
 
     0.415
Your Current Organism:
Jannaschia pohangensis
NCBI taxonomy Id: 390807
Other names: DSM 19073, J. pohangensis, Jannaschia pohangensis Kim et al. 2008, KACC 11609, strain H1-M8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.