Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFJ11998.1 | SFJ42155.1 | SAMN04488095_2236 | SAMN04488095_2815 | Serine/threonine-protein kinase RsbW. | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.954 |
SFJ11998.1 | SFJ42186.1 | SAMN04488095_2236 | SAMN04488095_2816 | Serine/threonine-protein kinase RsbW. | Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.954 |
SFJ11998.1 | SFJ42216.1 | SAMN04488095_2236 | SAMN04488095_2817 | Serine/threonine-protein kinase RsbW. | Hypothetical protein. | 0.954 |
SFJ11998.1 | SFJ42463.1 | SAMN04488095_2236 | SAMN04488095_2825 | Serine/threonine-protein kinase RsbW. | Hypothetical protein. | 0.954 |
SFJ11998.1 | SFJ42602.1 | SAMN04488095_2236 | SAMN04488095_2830 | Serine/threonine-protein kinase RsbW. | Flagellar biosynthetic protein FliQ. | 0.954 |
SFJ11998.1 | SFJ42632.1 | SAMN04488095_2236 | SAMN04488095_2831 | Serine/threonine-protein kinase RsbW. | Flagellar hook-basal body complex protein FliE. | 0.513 |
SFJ11998.1 | SFJ42660.1 | SAMN04488095_2236 | SAMN04488095_2832 | Serine/threonine-protein kinase RsbW. | Flagellar basal-body rod protein FlgC; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.823 |
SFJ11998.1 | SFJ42690.1 | SAMN04488095_2236 | SAMN04488095_2833 | Serine/threonine-protein kinase RsbW. | Flagellar basal-body rod protein FlgB. | 0.999 |
SFJ11998.1 | SFJ57071.1 | SAMN04488095_2236 | SAMN04488095_3123 | Serine/threonine-protein kinase RsbW. | Haem-NO-binding. | 0.999 |
SFJ11998.1 | flgH | SAMN04488095_2236 | SAMN04488095_2826 | Serine/threonine-protein kinase RsbW. | Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.999 |
SFJ42155.1 | SFJ11998.1 | SAMN04488095_2815 | SAMN04488095_2236 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Serine/threonine-protein kinase RsbW. | 0.954 |
SFJ42155.1 | SFJ42186.1 | SAMN04488095_2815 | SAMN04488095_2816 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.999 |
SFJ42155.1 | SFJ42216.1 | SAMN04488095_2815 | SAMN04488095_2817 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Hypothetical protein. | 0.999 |
SFJ42155.1 | SFJ42463.1 | SAMN04488095_2815 | SAMN04488095_2825 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Hypothetical protein. | 0.999 |
SFJ42155.1 | SFJ42602.1 | SAMN04488095_2815 | SAMN04488095_2830 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar biosynthetic protein FliQ. | 0.999 |
SFJ42155.1 | SFJ42632.1 | SAMN04488095_2815 | SAMN04488095_2831 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar hook-basal body complex protein FliE. | 0.993 |
SFJ42155.1 | SFJ42660.1 | SAMN04488095_2815 | SAMN04488095_2832 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar basal-body rod protein FlgC; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.999 |
SFJ42155.1 | SFJ42690.1 | SAMN04488095_2815 | SAMN04488095_2833 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar basal-body rod protein FlgB. | 0.999 |
SFJ42155.1 | SFJ57071.1 | SAMN04488095_2815 | SAMN04488095_3123 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Haem-NO-binding. | 0.749 |
SFJ42155.1 | flgH | SAMN04488095_2815 | SAMN04488095_2826 | Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.999 |
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