STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ73449.1Protein-disulfide isomerase. (217 aa)    
Predicted Functional Partners:
SFJ73475.1
Hypothetical protein.
 
     0.855
SFI96689.1
Suppressor for copper-sensitivity B.
  
 
 0.843
SFJ73503.1
A/G-specific DNA-adenine glycosylase; Adenine glycosylase active on G-A mispairs.
       0.725
SFI96729.1
Protein-disulfide isomerase.
  
     0.699
SFI23472.1
Disulfide bond formation protein DsbB.
 
 
 0.669
SFJ53623.1
Cell division protein FtsW; Belongs to the SEDS family.
  
    0.525
SFI35500.1
Hypothetical protein; Manually curated.
  
     0.522
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.521
SFJ73530.1
Alkane 1-monooxygenase.
       0.511
SFI91350.1
Thiol-disulfide isomerase or thioredoxin.
 
 
 0.465
Your Current Organism:
Jannaschia pohangensis
NCBI taxonomy Id: 390807
Other names: DSM 19073, J. pohangensis, Jannaschia pohangensis Kim et al. 2008, KACC 11609, strain H1-M8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.