Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rbsAABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (509 aa)    
Predicted Functional Partners:
Tpet_0812
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 0.994
Tpet_0810
PFAM: periplasmic binding protein/LacI transcriptional regulator.
 
 0.992
Tpet_1793
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 0.989
Tpet_1794
Monosaccharide-transporting ATPase; PFAM: periplasmic binding protein/LacI transcriptional regulator.
 
 0.971
Tpet_1792
PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
 
0.905
xylB
TIGRFAM: xylulokinase; PFAM: carbohydrate kinase, FGGY.
  
  
 0.822
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
   
   0.800
rbsD
RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.796
Tpet_0820
PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
     0.604
Tpet_0819
PFAM: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.601
Your Current Organism:
Thermotoga petrophila
NCBI taxonomy Id: 390874
Other names: T. petrophila RKU-1, Thermotoga petrophila RKU-1, Thermotoga petrophila str. RKU-1, Thermotoga petrophila strain RKU-1, Thermotoga sp. RKU-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.