STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpet_1773Hypothetical protein. (355 aa)    
Predicted Functional Partners:
Tpet_1772
Adenine-specific DNA methylase containing a Zn-ribbon-like protein.
       0.773
Tpet_1769
PFAM: helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like.
       0.705
Tpet_1770
Hypothetical protein.
       0.705
Tpet_1771
Hypothetical protein.
       0.705
Tpet_1774
Hypothetical protein.
       0.570
Tpet_1775
PFAM: PglZ domain.
       0.417
Tpet_1776
ATPase (AAA+ superfamily)-like protein.
       0.417
Your Current Organism:
Thermotoga petrophila
NCBI taxonomy Id: 390874
Other names: T. petrophila RKU-1, Thermotoga petrophila RKU-1, Thermotoga petrophila str. RKU-1, Thermotoga petrophila strain RKU-1, Thermotoga sp. RKU-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.