STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOE90790.1Zinc ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)    
Predicted Functional Partners:
znuC
Zinc ABC transporter ATP-binding protein ZnuC; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
 
 
 0.992
OOE90792.1
Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.972
OOE86796.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.923
OOE90789.1
Murein DD-endopeptidase MepM; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.922
OOE86797.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.906
OOE86798.1
Manganese/iron transporter ATP-binding protein; With SitACD is involved in the transport of manganese and iron; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.898
OOE86799.1
Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.
 
  
0.700
fur-2
Transcriptional repressor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family.
  
  
 0.540
OOE90788.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.537
OOE88372.1
Methionine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.493
Your Current Organism:
Salinivibrio sharmensis
NCBI taxonomy Id: 390883
Other names: DSM 18182, S. sharmensis, Salinivibrio sharmensis Romano et al. 2011, strain BAG
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