Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OOE88899.1 | OOE90236.1 | BZG74_06565 | BZG74_02740 | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peroxide stress protein YaaA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0246 family. | 0.436 |
OOE90235.1 | OOE90236.1 | BZG74_02735 | BZG74_02740 | Sodium:alanine symporter family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peroxide stress protein YaaA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0246 family. | 0.553 |
OOE90236.1 | OOE88899.1 | BZG74_02740 | BZG74_06565 | Peroxide stress protein YaaA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0246 family. | Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.436 |
OOE90236.1 | OOE90235.1 | BZG74_02740 | BZG74_02735 | Peroxide stress protein YaaA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0246 family. | Sodium:alanine symporter family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.553 |
OOE90236.1 | mnmC | BZG74_02740 | BZG74_04195 | Peroxide stress protein YaaA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0246 family. | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | 0.467 |
mnmC | OOE90236.1 | BZG74_04195 | BZG74_02740 | tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | Peroxide stress protein YaaA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0246 family. | 0.467 |