STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOE88149.1Topoisomerase II; Derived by automated computational analysis using gene prediction method: Protein Homology. (114 aa)    
Predicted Functional Partners:
OOE88147.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.791
OOE88229.1
Molybdopterin-guanine dinucleotide biosynthesis protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.760
OOE90339.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.754
OOE90747.1
DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.747
OOE86618.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.736
OOE89671.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.728
OOE86078.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.691
OOE91011.1
TIGR03503 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.685
OOE85926.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.684
OOE87660.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.663
Your Current Organism:
Salinivibrio sharmensis
NCBI taxonomy Id: 390883
Other names: DSM 18182, S. sharmensis, Salinivibrio sharmensis Romano et al. 2011, strain BAG
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.