STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720965_00387Unannotated protein. (389 aa)    
Predicted Functional Partners:
GCA_000720965_00264
Unannotated protein.
   
  
 0.833
GCA_000720965_04134
Unannotated protein.
  
  
 0.723
GCA_000720965_00058
Unannotated protein.
 
   
0.719
GCA_000720965_06015
Unannotated protein.
 
   
0.717
GCA_000720965_00154
Unannotated protein.
 
   
0.709
GCA_000720965_04596
Unannotated protein.
 
   
0.701
GCA_000720965_03904
Unannotated protein.
   
  
 0.674
GCA_000720965_00452
Unannotated protein.
    
 0.652
GCA_000720965_06377
Unannotated protein.
  
 
 0.650
GCA_000720965_00388
Unannotated protein.
  
    0.553
Your Current Organism:
Actinocatenispora sera
NCBI taxonomy Id: 390989
Other names: A. sera, Actinocatenispora sera Matsumoto et al. 2007, JCM 15920, NBRC 101916, NRRL B-24477, strain KV-744
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.