STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720965_00463Unannotated protein. (135 aa)    
Predicted Functional Partners:
GCA_000720965_04616
Unannotated protein.
  
 0.997
GCA_000720965_01908
Unannotated protein.
  
 0.995
GCA_000720965_01914
Unannotated protein.
  
 0.863
GCA_000720965_00856
Unannotated protein.
  
 
 0.817
GCA_000720965_00462
Unannotated protein.
       0.780
GCA_000720965_01909
Unannotated protein.
  
 0.745
GCA_000720965_01910
Unannotated protein.
  
 0.745
GCA_000720965_00464
Unannotated protein.
 
    
0.680
GCA_000720965_00513
Unannotated protein.
  
 0.668
GCA_000720965_00605
Unannotated protein.
 
    0.578
Your Current Organism:
Actinocatenispora sera
NCBI taxonomy Id: 390989
Other names: A. sera, Actinocatenispora sera Matsumoto et al. 2007, JCM 15920, NBRC 101916, NRRL B-24477, strain KV-744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.