STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720965_01693Unannotated protein. (337 aa)    
Predicted Functional Partners:
GCA_000720965_01692
Unannotated protein.
  
    0.790
GCA_000720965_01486
Unannotated protein.
  
 
 0.786
GCA_000720965_00570
Unannotated protein.
  
 
 0.731
GCA_000720965_01783
Unannotated protein.
  
 
 0.731
GCA_000720965_02812
Unannotated protein.
  
 
 0.731
GCA_000720965_00098
Unannotated protein.
  
  
 0.632
GCA_000720965_03373
Unannotated protein.
  
 
 0.575
GCA_000720965_01691
Unannotated protein.
       0.570
GCA_000720965_01573
Unannotated protein.
  
 
 0.539
GCA_000720965_01694
Unannotated protein.
       0.539
Your Current Organism:
Actinocatenispora sera
NCBI taxonomy Id: 390989
Other names: A. sera, Actinocatenispora sera Matsumoto et al. 2007, JCM 15920, NBRC 101916, NRRL B-24477, strain KV-744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.