STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720965_02123Unannotated protein. (526 aa)    
Predicted Functional Partners:
GCA_000720965_02319
Unannotated protein.
   
 
 0.684
GCA_000720965_02122
Unannotated protein.
       0.625
GCA_000720965_03093
Unannotated protein.
   
   0.508
GCA_000720965_02124
Unannotated protein.
       0.502
GCA_000720965_02121
Unannotated protein.
       0.495
GCA_000720965_02901
Unannotated protein.
    
   0.489
GCA_000720965_02630
Unannotated protein.
    
   0.485
GCA_000720965_03727
Unannotated protein.
   
 
  0.483
GCA_000720965_00082
Unannotated protein.
   
   0.479
GCA_000720965_00296
Unannotated protein.
   
   0.479
Your Current Organism:
Actinocatenispora sera
NCBI taxonomy Id: 390989
Other names: A. sera, Actinocatenispora sera Matsumoto et al. 2007, JCM 15920, NBRC 101916, NRRL B-24477, strain KV-744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.