STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720965_03690Unannotated protein. (125 aa)    
Predicted Functional Partners:
GCA_000720965_02385
Unannotated protein.
  
 0.986
GCA_000720965_01484
Unannotated protein.
 
 0.977
GCA_000720965_03489
Unannotated protein.
  
 0.960
GCA_000720965_02485
Unannotated protein.
    
 
 0.804
GCA_000720965_00184
Unannotated protein.
     
 0.761
GCA_000720965_03812
Unannotated protein.
  
 
 0.717
GCA_000720965_00760
Unannotated protein.
  
  0.712
GCA_000720965_00761
Unannotated protein.
  
  0.712
GCA_000720965_04748
Unannotated protein.
     
 0.701
GCA_000720965_03888
Unannotated protein.
  
 
 0.688
Your Current Organism:
Actinocatenispora sera
NCBI taxonomy Id: 390989
Other names: A. sera, Actinocatenispora sera Matsumoto et al. 2007, JCM 15920, NBRC 101916, NRRL B-24477, strain KV-744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.