STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720965_05094Unannotated protein. (458 aa)    
Predicted Functional Partners:
GCA_000720965_04022
Unannotated protein.
 
 
 0.852
GCA_000720965_05093
Unannotated protein.
      0.832
GCA_000720965_04893
Unannotated protein.
  
 
 0.829
GCA_000720965_03079
Unannotated protein.
  
  
 0.826
GCA_000720965_05112
Unannotated protein.
 
 
 0.804
GCA_000720965_00234
Unannotated protein.
   
   0.799
GCA_000720965_03475
Unannotated protein.
  
 
 0.780
GCA_000720965_00400
Unannotated protein.
    
 0.753
GCA_000720965_03434
Unannotated protein.
    
 0.753
GCA_000720965_03695
Unannotated protein.
    
 0.753
Your Current Organism:
Actinocatenispora sera
NCBI taxonomy Id: 390989
Other names: A. sera, Actinocatenispora sera Matsumoto et al. 2007, JCM 15920, NBRC 101916, NRRL B-24477, strain KV-744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.