STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720965_05178Unannotated protein. (796 aa)    
Predicted Functional Partners:
GCA_000720965_04390
Unannotated protein.
  
 0.889
GCA_000720965_04926
Unannotated protein.
  
 0.889
GCA_000720965_04803
Unannotated protein.
 
  
  0.686
GCA_000720965_05931
Unannotated protein.
 
  
  0.684
GCA_000720965_02370
Unannotated protein.
     
 0.651
GCA_000720965_02786
Unannotated protein.
 
  
  0.633
GCA_000720965_02487
Unannotated protein.
    
  0.628
GCA_000720965_01731
Unannotated protein.
   
 
  0.619
GCA_000720965_01467
Unannotated protein.
  
  
  0.600
GCA_000720965_04444
Unannotated protein.
   
 
  0.574
Your Current Organism:
Actinocatenispora sera
NCBI taxonomy Id: 390989
Other names: A. sera, Actinocatenispora sera Matsumoto et al. 2007, JCM 15920, NBRC 101916, NRRL B-24477, strain KV-744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.