STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720965_06242Unannotated protein. (296 aa)    
Predicted Functional Partners:
GCA_000720965_06241
Unannotated protein.
       0.663
GCA_000720965_00851
Unannotated protein.
  
     0.599
GCA_000720965_00502
Unannotated protein.
  
     0.583
GCA_000720965_02323
Unannotated protein.
  
     0.557
GCA_000720965_02319
Unannotated protein.
  
    0.531
GCA_000720965_00961
Unannotated protein.
  
     0.515
GCA_000720965_04168
Unannotated protein.
  
     0.504
GCA_000720965_05852
Unannotated protein.
  
     0.492
GCA_000720965_02807
Unannotated protein.
     
 0.452
GCA_000720965_00912
Unannotated protein.
  
     0.446
Your Current Organism:
Actinocatenispora sera
NCBI taxonomy Id: 390989
Other names: A. sera, Actinocatenispora sera Matsumoto et al. 2007, JCM 15920, NBRC 101916, NRRL B-24477, strain KV-744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.