STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smal_0118PFAM: alpha/beta hydrolase fold; KEGG: mmr:Mmar10_1192 alpha/beta hydrolase fold. (503 aa)    
Predicted Functional Partners:
Smal_0117
C-terminal ATPase domain signal transduction-like protein; KEGG: fjo:Fjoh_4494 hypothetical protein.
 
     0.816
Smal_0116
PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: fjo:Fjoh_4495 two component transcriptional regulator, LytTR family.
 
     0.649
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
   0.623
Smal_2876
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xcb:XC_1545 Oar protein.
  
     0.622
Smal_0119
MltA domain protein; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division.
       0.580
Smal_2090
KEGG: swd:Swoo_4128 hypothetical protein.
  
     0.551
apaH
Bis(5'nucleosyl)-tetraphosphatase, ApaH; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
  0.549
Smal_1953
KEGG: xom:XOO_1811 hypothetical protein.
  
     0.534
Smal_0564
PFAM: Fimbrial protein; KEGG: xfa:XF0077 fimbrial adhesin precursor.
  
     0.529
Smal_0342
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: saz:Sama_3060 TonB-dependent receptor, plug.
  
     0.528
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.