STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smal_0166KEGG: xcv:XCV0238 putative secreted protein. (105 aa)    
Predicted Functional Partners:
Smal_3275
PFAM: type IV pilus assembly PilZ; KEGG: xcb:XC_0965 hypothetical protein.
  
     0.740
Smal_0167
PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: xcb:XC_0222 3-oxoacyl-(acyl carrier protein) synthase III.
 
     0.665
Smal_3094
KEGG: xcb:XC_1177 hypothetical protein.
  
     0.650
Smal_3274
PFAM: protein of unknown function DUF1631; KEGG: xcb:XC_0964 hypothetical protein.
  
     0.607
Smal_0463
PFAM: TfoX domain protein; KEGG: xcb:XC_3648 hypothetical protein.
  
     0.605
Smal_3083
PFAM: CheW domain protein; KEGG: xac:XAC3096 hypothetical protein.
  
     0.604
Smal_0129
PFAM: HemY domain protein; KEGG: xac:XAC0214 porphyrin biosynthesis protein.
  
     0.597
Smal_0554
KEGG: xac:XAC3536 general secretion pathway protein M.
  
     0.591
Smal_3038
KEGG: xcv:XCV3162 hypothetical protein.
  
     0.573
Smal_0235
PFAM: Sporulation domain protein; KEGG: xac:XAC4016 hypothetical protein.
  
     0.566
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.