STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smal_0499PFAM: FAD linked oxidase domain protein; KEGG: xac:XAC3590 oxidoreductase. (437 aa)    
Predicted Functional Partners:
Smal_0500
PFAM: UbiA prenyltransferase; KEGG: xac:XAC3589 hypothetical protein.
 
  
 0.970
Smal_0498
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: xac:XAC3591 short chain dehydrogenase.
 
  
 0.951
Smal_0497
KEGG: maq:Maqu_1646 hypothetical protein.
 
     0.943
Smal_0502
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: xac:XAC3586 electron transfer flavoprotein beta subunit.
  
 
 0.729
Smal_0501
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: xcb:XC_3615 electron transfer flavoprotein alpha subunit.
  
 
 0.727
plsB
Glycerol-3-phosphate O-acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: xcc:XCC4128 glycerol-3-phosphate acyltransferase; Belongs to the GPAT/DAPAT family.
  
 
 0.662
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
    
 0.522
lldD
FMN-dependent alpha-hydroxy acid dehydrogenase; Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain; Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family.
  
 0.521
Smal_0064
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: xcv:XCV0037 glutamate synthase subunit alpha.
     
 0.480
Smal_3352
PFAM: phosphate acetyl/butaryl transferase; malic protein domain protein; malic protein NAD-binding; KEGG: xfm:Xfasm12_0295 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), phosphate acetyltransferase.
  
  
 0.460
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.