Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
Smal_1069KEGG: aha:AHA_1467 hypothetical protein. (337 aa)    
Predicted Functional Partners:
Smal_1070
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rxy:Rxyl_0464 general substrate transporter.
       0.558
Smal_1068
Hypothetical protein.
       0.528
Smal_1067
PFAM: metallophosphoesterase; KEGG: psp:PSPPH_2766 Ser/Thr protein phosphatase family protein.
       0.401
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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