Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Smal_2007PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bac:BamMC406_5270 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (262 aa)    
Predicted Functional Partners:
Smal_2008
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pfl:PFL_2803 oxidoreductase, zinc-binding.
 
    0.702
Smal_2005
PFAM: regulatory protein TetR; KEGG: bam:Bamb_4737 transcriptional regulator, TetR family.
 
     0.640
Smal_2006
PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: ent:Ent638_2277 NADH:flavin oxidoreductase/NADH oxidase.
  
  
 0.600
Smal_2069
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mmr:Mmar10_0259 short-chain dehydrogenase/reductase SDR.
  
 
   0.461
Smal_3492
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: xom:XOO_0643 oxidoreductase.
  
 
   0.439
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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