STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smal_2305PFAM: small multidrug resistance protein; KEGG: cvi:CV_1279 probable multidrug transmembrane resistance signal peptide protein. (117 aa)    
Predicted Functional Partners:
Smal_2304
PFAM: small multidrug resistance protein; KEGG: cvi:CV_1278 probable multidrug transmembrane resistance signal peptide protein.
 
   
 0.946
Smal_1868
Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
   
  
 0.580
Smal_2717
PFAM: polysaccharide deacetylase; KEGG: xom:XOO_3692 HmsF protein.
  
  
 0.578
Smal_1869
PFAM: export protein FliQ family 3; KEGG: xom:XOO_2471 flagellar biosynthesis.
      
 0.573
Smal_2306
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE1223 putative LysR-family transcriptional regulatory protein.
       0.518
Smal_1830
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: xcb:XC_2332 enoyl-CoA hydratase.
      
 0.506
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.