STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smal_3199KEGG: cak:Caul_4070 hypothetical protein. (330 aa)    
Predicted Functional Partners:
Smal_3198
TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: eba:ebA3983 putative sodium/alanine symporter family protein.
       0.768
Smal_0151
PFAM: aminoglycoside phosphotransferase; KEGG: xac:XAC3528 hypothetical protein.
  
     0.743
Smal_2090
KEGG: swd:Swoo_4128 hypothetical protein.
  
     0.731
Smal_0564
PFAM: Fimbrial protein; KEGG: xfa:XF0077 fimbrial adhesin precursor.
  
     0.727
Smal_0113
TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: pst:PSPTO_3229 filamentous hemagglutinin, intein-containing, putative.
  
   
 0.717
Smal_3363
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xac:XAC4368 TonB-dependent receptor.
  
     0.626
Smal_3647
PFAM: protein of unknown function DUF1311; KEGG: atc:AGR_C_4360 hypothetical protein.
  
     0.593
Smal_3784
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: gdi:GDI0553 putative TonB-dependent receptor.
  
     0.593
Smal_2891
KEGG: lbi:LEPBI_I3169 hypothetical protein; putative signal peptide.
  
     0.590
Smal_3798
KEGG: pau:PA14_04020 hypothetical protein.
  
     0.583
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.