STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smal_3203PFAM: acriflavin resistance protein; KEGG: xcb:XC_0996 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1041 aa)    
Predicted Functional Partners:
Smal_3204
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: xcv:XCV3444 membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.993
Smal_1636
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: xcv:XCV2230 membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.960
Smal_3343
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: xac:XAC3463 TolC protein.
 
 0.947
Smal_2607
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: xcc:XCC2367 multidrug resistance protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  0.908
Smal_1793
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rso:RSp0313 probable multidrug efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  0.902
Smal_0920
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: har:HEAR2381 component of acridine efflux pump; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  0.900
Smal_3468
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: har:HEAR2381 component of acridine efflux pump; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  0.894
Smal_3466
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: har:HEAR2383 outer membrane transport protein involved toxic tolerance.
 
 
  0.848
Smal_3202
PFAM: GCN5-related N-acetyltransferase; KEGG: xac:XAC3317 acetyltransferase.
       0.784
Smal_3689
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: xac:XAC3848 membrane fusion protein precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.663
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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