STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smal_3209Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xcv:XCV3457 transcriptional regulator CysB-like protein. (327 aa)    
Predicted Functional Partners:
Smal_0830
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bcm:Bcenmc03_4209 transcriptional regulator, LysR family.
  
     0.656
Smal_2562
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pau:PA14_48500 putative transcriptional regulator.
  
     0.634
Smal_1564
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xcv:XCV1538 transcriptional regulator, LysR family.
  
     0.619
Smal_2844
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:PflO1_0102 transcriptional regulator, LysR family.
  
     0.612
Smal_1291
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reu:Reut_A1632 transcriptional regulator, LysR family.
  
     0.607
Smal_1967
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xcb:XC_0040 transcriptional regulator LysR family.
  
     0.544
Smal_0639
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: psp:PSPPH_1493 transcriptional regulator, LysR family.
  
     0.539
Smal_0928
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ent:Ent638_3137 transcriptional regulator, LysR family.
  
     0.538
Smal_2575
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RS05458 probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.536
Smal_1678
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:PflO1_2436 transcriptional regulator, LysR family.
  
     0.534
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
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