STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smal_3484PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xcv:XCV3788 D-methionine ABC transporter permease. (229 aa)    
Predicted Functional Partners:
metN
ABC transporter related; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
 0.999
Smal_3526
TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: xcv:XCV3787 outer membrane lipoprotein.
 0.999
Smal_1700
Polar amino acid ABC transporter, inner membrane subunit; KEGG: atc:AGR_L_2810 polar amino acid transport system permease proetin / polar amino acid transport system ATP-binding proetin; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; ABC transporter related; SMART: AAA ATPase.
 
   
 0.652
Smal_0614
KEGG: xac:XAC0791 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
   
    0.457
Smal_2038
PFAM: methylenetetrahydrofolate reductase; KEGG: dac:Daci_2669 methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
   
    0.457
Smal_3486
PFAM: protein of unknown function DUF6 transmembrane; KEGG: xac:XAC3670 hypothetical protein.
       0.439
Your Current Organism:
Stenotrophomonas maltophilia R5513
NCBI taxonomy Id: 391008
Other names: S. maltophilia R551-3, Stenotrophomonas maltophilia R551-3, Stenotrophomonas maltophilia str. R551-3, Stenotrophomonas maltophilia strain R551-3
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.