Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tmel_0366PFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (353 aa)    
Predicted Functional Partners:
Tmel_0365
PFAM: glycosyl transferase, group 1.
 
  
 0.909
Tmel_1339
PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase-like; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 0.880
Tmel_0364
PFAM: glycosyl transferase, group 1.
  
  
 0.811
Tmel_0367
TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: phosphoribosyltransferase; helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like.
  
    0.631
Tmel_0361
PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein.
  
  
 0.613
Tmel_1074
PFAM: polysaccharide biosynthesis protein.
  
  
 0.613
Tmel_0659
PFAM: lipopolysaccharide biosynthesis protein.
  
  
 0.572
Tmel_1052
PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain.
 
  
 0.465
Tmel_0368
PFAM: SMF family protein.
       0.461
Tmel_0513
PFAM: glycosyl transferase, group 1.
  
  
 0.454
Your Current Organism:
Thermosipho melanesiensis
NCBI taxonomy Id: 391009
Other names: T. melanesiensis BI429, Thermosipho melanesiensis BI429, Thermosipho melanesiensis str. BI429, Thermosipho melanesiensis strain BI429
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