Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EHF_0174 | EHF_0514 | EHF_0174 | EHF_0514 | dnaJ domain protein. | istB-like ATP binding family protein; Belongs to the ClpA/ClpB family. | 0.742 |
EHF_0174 | EHF_0660 | EHF_0174 | EHF_0660 | dnaJ domain protein. | Response regulator. | 0.606 |
EHF_0174 | EHF_0767 | EHF_0174 | EHF_0767 | dnaJ domain protein. | Hypothetical protein. | 0.987 |
EHF_0174 | clpP | EHF_0174 | EHF_0788 | dnaJ domain protein. | ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.550 |
EHF_0174 | dnaK | EHF_0174 | EHF_0414 | dnaJ domain protein. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.971 |
EHF_0174 | grpE | EHF_0174 | EHF_0895 | dnaJ domain protein. | grpE family protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depe [...] | 0.879 |
EHF_0174 | hscA | EHF_0174 | EHF_0562 | dnaJ domain protein. | fe-S protein assembly chaperone HscA; Belongs to the heat shock protein 70 family. | 0.971 |
EHF_0174 | htpG | EHF_0174 | EHF_0748 | dnaJ domain protein. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; Molecular chaperone. Has ATPase activity. | 0.972 |
EHF_0514 | EHF_0174 | EHF_0514 | EHF_0174 | istB-like ATP binding family protein; Belongs to the ClpA/ClpB family. | dnaJ domain protein. | 0.742 |
EHF_0514 | EHF_0660 | EHF_0514 | EHF_0660 | istB-like ATP binding family protein; Belongs to the ClpA/ClpB family. | Response regulator. | 0.652 |
EHF_0514 | EHF_0767 | EHF_0514 | EHF_0767 | istB-like ATP binding family protein; Belongs to the ClpA/ClpB family. | Hypothetical protein. | 0.686 |
EHF_0514 | clpP | EHF_0514 | EHF_0788 | istB-like ATP binding family protein; Belongs to the ClpA/ClpB family. | ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.934 |
EHF_0514 | dnaJ | EHF_0514 | EHF_0006 | istB-like ATP binding family protein; Belongs to the ClpA/ClpB family. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.764 |
EHF_0514 | dnaK | EHF_0514 | EHF_0414 | istB-like ATP binding family protein; Belongs to the ClpA/ClpB family. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.900 |
EHF_0514 | grpE | EHF_0514 | EHF_0895 | istB-like ATP binding family protein; Belongs to the ClpA/ClpB family. | grpE family protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depe [...] | 0.813 |
EHF_0514 | hscA | EHF_0514 | EHF_0562 | istB-like ATP binding family protein; Belongs to the ClpA/ClpB family. | fe-S protein assembly chaperone HscA; Belongs to the heat shock protein 70 family. | 0.900 |
EHF_0514 | htpG | EHF_0514 | EHF_0748 | istB-like ATP binding family protein; Belongs to the ClpA/ClpB family. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein; Molecular chaperone. Has ATPase activity. | 0.687 |
EHF_0514 | rlmE | EHF_0514 | EHF_0476 | istB-like ATP binding family protein; Belongs to the ClpA/ClpB family. | ftsJ-like methyltransferase family protein; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | 0.649 |
EHF_0660 | EHF_0174 | EHF_0660 | EHF_0174 | Response regulator. | dnaJ domain protein. | 0.606 |
EHF_0660 | EHF_0514 | EHF_0660 | EHF_0514 | Response regulator. | istB-like ATP binding family protein; Belongs to the ClpA/ClpB family. | 0.652 |
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