STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_0175PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: stp:Strop_0166 activator of HSP90 ATPase 1 family protein. (172 aa)    
Predicted Functional Partners:
Sare_0906
KEGG: stp:Strop_0969 hypothetical protein.
  
     0.509
Sare_0874
KEGG: stp:Strop_0932 hypothetical protein.
  
     0.482
Sare_0174
KEGG: stp:Strop_0165 ABC-type branched-chain amino acid transport systems periplasmic component-like protein.
       0.440
Sare_0176
KEGG: stp:Strop_0167 hypothetical protein.
       0.439
Sare_0177
Sterol 3-beta-glucosyltransferase; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl transferase family 28; KEGG: stp:Strop_0168 sterol 3-beta-glucosyltransferase.
       0.439
Sare_0647
KEGG: stp:Strop_3431 hypothetical protein.
  
     0.416
Sare_3808
KEGG: stp:Strop_3431 hypothetical protein.
  
     0.416
Sare_2293
KEGG: stp:Strop_2141 hypothetical protein.
  
     0.408
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.