STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_0484PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: plu:plu0757 hypothetical protein. (310 aa)    
Predicted Functional Partners:
Sare_3620
PFAM: Acyl transferase; KEGG: stp:Strop_3378 acyl transferase domain protein.
  
 
 0.970
Sare_0487
PFAM: phosphopantetheine-binding; KEGG: ttj:TTHA0414 acyl carrier protein.
 
  
 0.964
Sare_1058
PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: ppu:PP_3787 hypothetical protein.
  
  
  0.953
Sare_2154
PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: tth:TTC0343 3-oxoacyl-(acyl carrier protein) synthase.
  
  
  0.947
Sare_0485
PFAM: protein of unknown function DUF201; KEGG: cac:CA_P0138 hypothetical protein.
 
  
 0.944
Sare_0486
PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: atc:AGR_C_3079 hypothetical protein.
 
    0.905
accD
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA (By similarity). In the N-terminal section; belongs to the AccD/PCCB family.
  
  
 0.902
Sare_0491
PFAM: multi antimicrobial extrusion protein MatE; KEGG: plu:plu0761 hypothetical protein.
 
     0.901
Sare_1085
KEGG: stp:Strop_1192 hypothetical protein.
     
 0.900
Sare_2069
PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: sma:SAV1374 3-oxoacyl-ACP synthase III.
     
  0.900
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.