STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_0523KEGG: stp:Strop_0436 hypothetical protein. (154 aa)    
Predicted Functional Partners:
Sare_3334
Hypothetical protein; KEGG: fra:Francci3_3992 putative regulatory protein.
  
     0.694
Sare_1962
Transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein; KEGG: sma:SAP1p37 putative DNA-binding protein.
  
     0.656
Sare_0524
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; beta-phosphoglucomutase family hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: stp:Strop_0437 beta-phosphoglucomutase family hydrolase.
     
 0.599
Sare_0525
Kojibiose phosphorylase; PFAM: glycoside hydrolase family 65 domain protein; glycoside hydrolase family 65 central catalytic; KEGG: stp:Strop_0438 kojibiose phosphorylase.
       0.597
Sare_1959
Transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein; KEGG: sco:SCO4399 hypothetical protein.
  
     0.596
Sare_0214
KEGG: sco:SCO5420 cholesterol esterase.
  
     0.571
Sare_4840
KEGG: sen:SACE_5459 hypothetical protein.
  
     0.564
Sare_3057
PFAM: phosphopantetheine-binding; KEGG: stp:Strop_0682 phosphopantetheine-binding.
 
   0.562
Sare_1224
Regulator; KEGG: sco:SCO2192 regulator.
  
     0.522
Sare_0522
PFAM: glycosyl transferase family 2; CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: stp:Strop_0434 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase.
   
   0.517
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.