STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_0529KEGG: stp:Strop_0441 hypothetical protein. (218 aa)    
Predicted Functional Partners:
Sare_0937
KEGG: stp:Strop_1436 hypothetical protein.
 
    0.598
Sare_1456
KEGG: stp:Strop_1491 hypothetical protein.
  
    0.593
Sare_1457
KEGG: stp:Strop_1495 hypothetical protein.
  
    0.587
Sare_1678
KEGG: stp:Strop_1683 hypothetical protein.
  
     0.521
Sare_0906
KEGG: stp:Strop_0969 hypothetical protein.
  
     0.520
Sare_3383
KEGG: stp:Strop_3157 hypothetical protein.
  
 
 0.516
Sare_0105
KEGG: stp:Strop_0106 hypothetical protein.
  
 
   0.513
Sare_3559
KEGG: stp:Strop_3325 hypothetical protein.
  
    0.512
Sare_4473
KEGG: stp:Strop_4074 hypothetical protein.
  
    0.508
Sare_0874
KEGG: stp:Strop_0932 hypothetical protein.
 
 
 
 0.502
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.