STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_0612Recombinase; PFAM: Resolvase domain; Recombinase; KEGG: stp:Strop_2909 recombinase. (656 aa)    
Predicted Functional Partners:
Sare_0610
Hypothetical protein.
       0.678
Sare_0611
Hypothetical protein.
      
0.678
Sare_0613
KEGG: stp:Strop_0506 hypothetical protein.
       0.507
Sare_1568
KEGG: sen:SACE_6000 cell division FtsK/SpoIIIE.
  
   
 0.475
Sare_1567
Hypothetical protein; KEGG: mmu:100042292 similar to CG10953-PA.
  
     0.472
Sare_2153
FkbH like protein; TIGRFAM: HAD-superfamily phosphatase, subfamily IIIC; FkbH like protein; KEGG: fal:FRAAL4069 hypothetical protein.
  
     0.464
Sare_1480
PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: stp:Strop_1538 cytochrome c biogenesis protein, transmembrane region.
  
    0.443
Sare_1141
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: stp:Strop_1252 regulatory protein, TetR.
  
     0.420
Sare_0609
Hypothetical protein.
       0.414
Sare_2735
PFAM: protein of unknown function DUF1486; KEGG: mav:MAV_2173 hypothetical protein.
  
     0.414
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.