STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_0737KEGG: stp:Strop_0793 sulfate adenylyltransferase, small subunit; TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: phosphoadenosine phosphosulfate reductase. (303 aa)    
Predicted Functional Partners:
Sare_0738
Sulfate adenylyltransferase, large subunit; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
 0.999
Sare_4172
PFAM: adenylylsulfate kinase; KEGG: stp:Strop_3792 adenylylsulfate kinase.
 
 0.998
Sare_0736
PFAM: inositol monophosphatase; KEGG: stp:Strop_0792 inositol monophosphatase.
 
 
 0.976
Sare_4085
PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: stp:Strop_3704 nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein.
 
  
 0.965
Sare_4083
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
 
  
 0.962
Sare_3920
TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: stp:Strop_3545 uroporphyrin-III C-methyltransferase.
 
  
 0.925
Sare_1330
PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: stp:Strop_1373 phosphoesterase, RecJ domain protein.
   
 
  0.900
Sare_1771
PFAM: histidine triad (HIT) protein; KEGG: stp:Strop_1784 histidine triad (HIT) protein.
     
  0.900
Sare_2699
TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: stp:Strop_2517 uroporphyrin-III C-methyltransferase.
 
  
 0.888
Sare_0428
Uroporphyrinogen III synthase HEM4; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: stp:Strop_0358 uroporphyrinogen III synthase HEM4.
  
  
 0.692
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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