STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_0853PFAM: lipolytic protein G-D-S-L family; KEGG: stp:Strop_0910 lipolytic enzyme, G-D-S-L family. (361 aa)    
Predicted Functional Partners:
Sare_0852
PFAM: lipolytic protein G-D-S-L family; KEGG: stp:Strop_0909 lipolytic enzyme, G-D-S-L family.
 
    
0.934
Sare_0854
PFAM: protein of unknown function DUF1232; KEGG: stp:Strop_0911 protein of unknown function DUF1232.
 
     0.632
Sare_0851
KEGG: stp:Strop_0908 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.631
Sare_2860
KEGG: stp:Strop_2659 hypothetical protein.
  
     0.622
Sare_0207
PFAM: coagulation factor 5/8 type domain protein; KEGG: stp:Strop_0189 hypothetical protein.
  
     0.572
Sare_0213
KEGG: stp:Strop_0195 hypothetical protein.
  
     0.565
Sare_0209
KEGG: stp:Strop_0191 hypothetical protein.
  
     0.455
Sare_0855
TIGRFAM: cystathionine beta-synthase; PFAM: CBS domain containing protein; Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: stp:Strop_0912 cystathionine beta-synthase.
       0.452
Sare_1402
KEGG: stp:Strop_1444 hypothetical protein.
  
     0.438
Sare_4793
PFAM: Anion-transporting ATPase; KEGG: stp:Strop_4351 anion-transporting ATPase.
  
     0.426
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.