STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_0874KEGG: stp:Strop_0932 hypothetical protein. (1634 aa)    
Predicted Functional Partners:
Sare_3996
KEGG: stp:Strop_3614 hypothetical protein.
 
   
 0.788
Sare_4538
KEGG: stp:Strop_4117 hypothetical protein.
  
    0.787
Sare_0161
KEGG: stp:Strop_0153 hypothetical protein.
  
    0.783
Sare_3869
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: stp:Strop_3490 glyoxalase/bleomycin resistance protein/dioxygenase.
  
     0.774
Sare_2283
PFAM: sulfatase; KEGG: stp:Strop_2135 sulfatase.
  
     0.773
Sare_1697
KEGG: stp:Strop_1699 hypothetical protein.
  
     0.772
Sare_0105
KEGG: stp:Strop_0106 hypothetical protein.
 
   
 0.771
Sare_0453
KEGG: stp:Strop_0382 hypothetical protein.
  
     0.771
Sare_0906
KEGG: stp:Strop_0969 hypothetical protein.
  
     0.771
Sare_4474
KEGG: stp:Strop_4075 hypothetical protein.
  
     0.768
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.