Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Sare_0229 | Sare_0453 | KEGG: stp:Strop_0201 hypothetical protein. | KEGG: stp:Strop_0382 hypothetical protein. | 0.652 |
Sare_0229 | Sare_0509 | KEGG: stp:Strop_0201 hypothetical protein. | KEGG: stp:Strop_0421 hypothetical protein. | 0.679 |
Sare_0229 | Sare_1163 | KEGG: stp:Strop_0201 hypothetical protein. | KEGG: stp:Strop_1273 hypothetical protein. | 0.677 |
Sare_0229 | Sare_2480 | KEGG: stp:Strop_0201 hypothetical protein. | KEGG: stp:Strop_2337 hypothetical protein. | 0.470 |
Sare_0229 | Sare_3500 | KEGG: stp:Strop_0201 hypothetical protein. | KEGG: stp:Strop_3270 hypothetical protein. | 0.673 |
Sare_0229 | Sare_3869 | KEGG: stp:Strop_0201 hypothetical protein. | PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: stp:Strop_3490 glyoxalase/bleomycin resistance protein/dioxygenase. | 0.438 |
Sare_0229 | Sare_3914 | KEGG: stp:Strop_0201 hypothetical protein. | KEGG: stp:Strop_3539 hypothetical protein. | 0.540 |
Sare_0229 | Sare_5003 | KEGG: stp:Strop_0201 hypothetical protein. | PFAM: CDP-alcohol phosphatidyltransferase; KEGG: stp:Strop_4489 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.698 |
Sare_0453 | Sare_0229 | KEGG: stp:Strop_0382 hypothetical protein. | KEGG: stp:Strop_0201 hypothetical protein. | 0.652 |
Sare_0453 | Sare_0509 | KEGG: stp:Strop_0382 hypothetical protein. | KEGG: stp:Strop_0421 hypothetical protein. | 0.676 |
Sare_0453 | Sare_1163 | KEGG: stp:Strop_0382 hypothetical protein. | KEGG: stp:Strop_1273 hypothetical protein. | 0.741 |
Sare_0453 | Sare_2480 | KEGG: stp:Strop_0382 hypothetical protein. | KEGG: stp:Strop_2337 hypothetical protein. | 0.720 |
Sare_0453 | Sare_3500 | KEGG: stp:Strop_0382 hypothetical protein. | KEGG: stp:Strop_3270 hypothetical protein. | 0.685 |
Sare_0453 | Sare_3869 | KEGG: stp:Strop_0382 hypothetical protein. | PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: stp:Strop_3490 glyoxalase/bleomycin resistance protein/dioxygenase. | 0.774 |
Sare_0453 | Sare_3914 | KEGG: stp:Strop_0382 hypothetical protein. | KEGG: stp:Strop_3539 hypothetical protein. | 0.736 |
Sare_0453 | Sare_3915 | KEGG: stp:Strop_0382 hypothetical protein. | KEGG: stp:Strop_3540 hypothetical protein. | 0.739 |
Sare_0453 | Sare_5003 | KEGG: stp:Strop_0382 hypothetical protein. | PFAM: CDP-alcohol phosphatidyltransferase; KEGG: stp:Strop_4489 CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.702 |
Sare_0509 | Sare_0229 | KEGG: stp:Strop_0421 hypothetical protein. | KEGG: stp:Strop_0201 hypothetical protein. | 0.679 |
Sare_0509 | Sare_0453 | KEGG: stp:Strop_0421 hypothetical protein. | KEGG: stp:Strop_0382 hypothetical protein. | 0.676 |
Sare_0509 | Sare_1163 | KEGG: stp:Strop_0421 hypothetical protein. | KEGG: stp:Strop_1273 hypothetical protein. | 0.673 |
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