STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_1183PFAM: protein of unknown function DUF664; KEGG: stp:Strop_1293 protein of unknown function DUF664. (175 aa)    
Predicted Functional Partners:
Sare_1466
KEGG: stp:Strop_1512 hypothetical protein.
 
     0.653
Sare_4350
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: stp:Strop_3966 hypothetical protein.
 
     0.640
Sare_1463
KEGG: sen:SACE_2703 hypothetical protein.
 
     0.638
Sare_1184
KEGG: stp:Strop_1294 hypothetical protein.
       0.625
Sare_1813
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; KEGG: stp:Strop_1822 regulatory protein, ArsR.
  
     0.602
Sare_3891
KEGG: stp:Strop_3516 hypothetical protein.
  
     0.515
Sare_1186
PFAM: aminoglycoside phosphotransferase; KEGG: stp:Strop_1296 aminoglycoside phosphotransferase.
 
     0.494
Sare_0136
KEGG: stp:Strop_0131 hypothetical protein.
  
     0.476
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
       0.435
mca
LmbE family protein; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily.
  
   
 0.431
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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