STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_1271Methyltransferase type 11; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; UbiE/COQ5 methyltransferase; Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_3510 methyltransferase type 11. (274 aa)    
Predicted Functional Partners:
Sare_1262
KEGG: mul:MUL_2011 conserved polyketide synthase associated protein PapA5.
     
  0.900
Sare_1270
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; KEGG: kra:Krad_3437 regulatory protein LuxR.
       0.773
Sare_0237
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: stp:Strop_0211 methyltransferase type 11.
  
     0.619
menG
Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
  
     0.581
Sare_1272
PFAM: Transketolase domain protein; KEGG: sen:SACE_5763 putative transketolase.
       0.520
Sare_1273
PFAM: Transketolase central region; KEGG: sen:SACE_5762 transketolase B subunit.
       0.520
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.