STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_2029Beta-ketoacyl synthase; PFAM: phosphopantetheine-binding; Beta-ketoacyl synthase; Acyl transferase; KEGG: sen:SACE_5308 iterative type I polyketide synthase. (1263 aa)    
Predicted Functional Partners:
Sare_2028
PFAM: O-methyltransferase family 2; KEGG: bja:blr7665 putative methyltransferase.
 
  
  0.971
Sare_0357
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_4110 putative non-ribosomal peptide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
   0.935
Sare_0718
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; KEGG: stp:Strop_0776 amino acid adenylation domain.
 
   0.916
Sare_1269
Oleoyl-(acyl-carrier-protein) hydrolase; PFAM: Thioesterase; KEGG: stp:Strop_2763 thioesterase.
  
 0.911
Sare_3010
PFAM: AMP-dependent synthetase and ligase; KEGG: stp:Strop_4144 AMP-dependent synthetase and ligase.
 
 0.906
Sare_4891
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: stp:Strop_4417 amino acid adenylation domain.
   0.906
Sare_4894
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: stp:Strop_4420 amino acid adenylation domain.
   0.901
Sare_4562
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; Methyltransferase type 11; Methyltransferase type 12; KEGG: mxa:MXAN_3779 non-ribosomal peptide synthetase/polyketide synthase.
 
 0.900
Sare_4983
TIGRFAM: Quinone oxidoreductase putative PIG3; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: stp:Strop_4470 alcohol dehydrogenase, zinc-binding domain protein.
 
  
   0.889
Sare_2827
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: stp:Strop_2630 alcohol dehydrogenase, zinc-binding domain protein.
 
  
   0.877
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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