STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_2136Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: sma:SAV6671 two-component system response regulator. (240 aa)    
Predicted Functional Partners:
Sare_1783
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: stp:Strop_1797 histidine kinase, dimerisation and phosphoacceptor region.
 
 0.828
Sare_3510
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: stp:Strop_3278 ATP-binding region, ATPase domain protein domain protein.
 
 
 0.822
Sare_0424
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: stp:Strop_0354 integral membrane sensor signal transduction histidine kinase.
 
 
 0.819
Sare_4229
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; KEGG: stp:Strop_3839 regulatory protein, LuxR.
  
     0.749
Sare_4861
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: stp:Strop_2459 histidine kinase, dimerisation and phosphoacceptor region.
 
 0.738
Sare_1529
PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: stp:Strop_1578 ATP-binding region, ATPase domain protein domain protein.
 
 
 0.733
Sare_0350
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; KEGG: mjl:Mjls_0940 response regulator receiver protein.
  
     0.722
Sare_0351
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; KEGG: mjl:Mjls_0940 response regulator receiver protein.
  
     0.705
Sare_1602
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: stp:Strop_0396 integral membrane sensor signal transduction histidine kinase.
 
 
 0.660
Sare_3937
Putative signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: fal:FRAAL1256 hypothetical protein; putative membrane protein; putative ATP-binding region, ATPase-like domains.
 
   0.593
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.