Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Sare_2139PFAM: amidohydrolase; Amidohydrolase 3; KEGG: ang:An14g03560 hypothetical protein Pfam: Amidohydro_1 Amidohydro_3. (408 aa)    
Predicted Functional Partners:
Sare_1191
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: stp:Strop_1302 amidohydrolase.
  
     0.747
Sare_0996
KEGG: stp:Strop_1106 histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase.
  
  
 0.695
Sare_2092
KEGG: rme:Rmet_0231 histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase.
  
  
 0.695
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
  
 0.685
Sare_1413
F45E12.5a-like protein; KEGG: mcc:710736 similar to F45E12.5a.
  
  
 0.685
Sare_2140
PFAM: NIPSNAP family containing protein; KEGG: asa:ASA_0977 hypothetical protein.
       0.655
Sare_2141
KEGG: rha:RHA1_ro00624 hypothetical protein.
       0.654
Sare_2142
KEGG: nfa:nfa50150 hypothetical protein.
       0.654
Sare_2568
TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: stp:Strop_2416 amidohydrolase.
 
   
 0.491
Sare_2137
PFAM: FAD dependent oxidoreductase; KEGG: aav:Aave_2431 FAD dependent oxidoreductase.
       0.420
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
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