STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sare_2145PFAM: extracellular solute-binding protein family 5; KEGG: stp:Strop_4336 extracellular solute-binding protein, family 5. (601 aa)    
Predicted Functional Partners:
Sare_2146
KEGG: mgr:MGG_02199 hypothetical protein.
 
     0.871
Sare_2148
PFAM: protein of unknown function DUF201; KEGG: plu:plu0116 hypothetical protein.
 
     0.851
Sare_2147
PFAM: amidinotransferase; KEGG: sen:SACE_6885 amidinotransferase.
       0.773
Sare_0646
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: stp:Strop_0699 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
  
    0.675
Sare_2149
Methionine--tRNA ligase; PFAM: tRNA synthetase class I (M); KEGG: sco:SCO6436 tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.666
Sare_2144
PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; KEGG: sco:SCO6898 carboxylase.
 
     0.657
Sare_2137
PFAM: FAD dependent oxidoreductase; KEGG: aav:Aave_2431 FAD dependent oxidoreductase.
  
     0.553
Sare_2151
KEGG: bch:Bcen2424_1643 lysine/ornithine N-monooxygenase.
 
     0.518
Sare_4780
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_4338 binding-protein-dependent transport systems inner membrane component.
 
 
 0.507
Sare_4779
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_4337 binding-protein-dependent transport systems inner membrane component.
 
 
 0.497
Your Current Organism:
Salinispora arenicola
NCBI taxonomy Id: 391037
Other names: S. arenicola CNS-205, Salinispora arenicola CNS-205, Salinispora arenicola str. CNS-205, Salinispora arenicola strain CNS-205
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.